Rewired or Gated? How Instruction Tuning Shapes Knowledge-Conflict Circuits in LLMs

Shubham Santosh Pandere, Gautam Ranka, Ritika Varshney, Navya Deshmukh, Roushni Sareen +1

In language models, the choice between believing the prompt and believing the weights is made by a handful of identifiable attention heads. Instruction tuning changes how models behave under conflict, but whether it rewires the underlying circuit or merely gates/reweights already present components, remains unknown. We provide the first mechanistic base-vs-instruct comparison of conflict-resolution circuits, across three families (Llama-3.2-3B, Qwen-2.5-3B, Gemma-3-4B). Five independent methods, node and edge attribution, superposition role analysis, causal ablation, and path patching, converge on gating, with the same heads, in the same late-layers, are found to be reweighted rather than replaced with a high node overlap (0.60-0.82). Behaviorally, tuning shifts models toward parametric memory, making instruct models reject a terse counterfactual context far more than base ones, the opposite of a naive user-following expectation. Yet this added skepticism is a factor of framing since it disappears when the same false claim is delivered as a coherent, evidential passage. The robustness that instruction tuning buys against terse injection is therefore real but narrow. More broadly,…