WhatWorkedBench: Benchmarking Experimental Understanding in AI Agents

Jingjie Ning, Xueqi Li, Yibo Kong, Dongting Li

AI research agents must predict the effects of computational changes after budgeted experiments. WhatWorkedBench evaluates this experimental understanding through a delivered response surface of configuration scores. Agents inspect workflow code and buy measurements; exhaustive CPU references score conditional component effects, mean pair interactions, configuration choice, and delivery. The catalog spans 36 task conditions, 30 sources, 8 workflow families, and 1248 indexed configuration records, with 4,206 numerical controls. At eight purchased measurements plus two free anchors, pair-effect ridge selects an exact optimum on 15 of 22 sources; 13 of these cases have at least one conditional-effect error exceeding 10% of the task utility range. Shared-estimator comparisons measure acquisition and reconstruction on common observations. In a prospective typed study on 12 four-factor sources, DeepSeek Flash submits 12/12 direct tables and gains 0.147 recovery over a Gaussian process (GP) fitted to the same observations. Pro delivers 11/12 artifacts, with an all-attempt GP difference of -0.001 and a delivered-only difference of +0.063. On six prespecified new agent-evaluation sources,…