AutoPDEBench: Benchmarking LLM Auto-Research for Neural PDE Solver Design

Ruoyan Li, Wei Wang, Yizhou Sun

Partial differential equations (PDEs) are essential for modeling complex physical systems, and neural solvers have recently emerged as powerful data-driven tools for numerically solving them. However, existing neural solvers struggle with domain-specific challenges, such as varying parameters and high-speed flows, necessitating specialized architectures. Manually designing these specialized solver architectures is a highly iterative, time-consuming process requiring deep expertise, creating a significant bottleneck in scientific discovery. We propose leveraging autonomous AI research agents to automate the synthesis of specialized solvers. To support this, we introduce AutoPDEBench, a benchmark dedicated to LLM-driven automated research for PDE solver design. The benchmark includes 25 challenging datasets featuring both novel and actively studied physical scenarios. We evaluate a suite of general-purpose models (transformer, ROM, and graph-based) alongside a multi-agent instantiation of the iterative automated research pipeline, which serves as an agentic baseline. Empirical results show that the iterative automated research system significantly outperforms the general-purpose…