Graph Memory: Spectral Associative Memory via Dirichlet Energy

Zhaoyang Shi

Dense associative memories have traditionally focused on storing and retrieving vector-valued patterns. Many modern machine learning problems, however, are naturally graph-structured, requiring memory mechanisms for relational patterns, graph diffusion geometries, community structures, and graph-based inductive biases. We propose a spectral dense associative memory for storage and retrieval of graph data, extending the classical vector-valued memories. Retrieval is performed through a log-sum-exp energy induced by Dirichlet energy with spectral norm distances, producing a softmax-weighted average of the stored Laplacians that remains a valid graph Laplacian. We prove exponential storage capacity and exponentially decaying retrieval error. Beyond graph retrieval, we establish theoretical guarantees for spectral quantities central to graph learning, including eigenvalues, eigenspaces, and diffusion operators. Experiments on synthetic graph data, real-world airline network, protein conformation data and wearable sensor data demonstrate robust graph retrieval while preserving the graph geometry of the data. Our framework provides a new associative memory paradigm for graph-structured…